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Removes shRNAs with low read counts in original DNA plasmid pool. Outputs a GCT file containing filtered shRNA data and a GCT file containing the mean read count for each shRNA in the original DNA plasmid pool.

Operating System:
Original Author:
Barbara Weir, Sara Howell;The Broad Institute
Uploaded by:
AchillesTeam on October 08, 2014 09:36
Version Comment:
changed job error status


Posted by bhill on March 10, 2017 16:20

Note that the author lists this module as archived. It is no longer in use, but there are publications which refer to it by this name. For the current version of this method, please see FilterLowPert. (http://gparc.org/view/urn:lsid:8080.gpbroad.broadinstitute.org:genepatternmodules:485:22) This module has also been removed from the GenePattern Public server, as it is archived.

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