Removes shRNAs with low read counts in original DNA plasmid pool. Outputs a GCT file containing filtered shRNA data and a GCT file containing the mean read count for each shRNA in the original DNA plasmid pool.
If you are looking to contact the Achilles Team, please note the primary module developer, Barbara Weir, is no longer at the Broad Institute.
She has set up the following email address to answer questions about the Achilles Modules.
Note that the author lists this module as archived. It is no longer in use, but there are publications which refer to it by this name. For the current version of this method, please see FilterLowPert. (http://gparc.org/view/urn:lsid:8080.gpbroad.broadinstitute.org:genepatternmodules:485:22)
This module has also been removed from the GenePattern Public server, as it is archived.
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