Converts acgh files to a tab-delimited format usable by Genomica.

This module will apply the gates in a Gating-ML file version 1.5 or 2.0 to an FCS data file. Each gate in the Gating-ML file creates a population saved in a CSV file. The CSV file format can be used by many other modules...

Annotates CpGs or windows

Performs statistical analysis on groups.

Calculates CpG methylation correlation

Performs statistical analysis on groups.

Use this module to create index files for the reference files.

Maps reads to reference genome.

Generates files for UCSC browser

Measures methylation over a window